BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015G01LP1|AL426892
(1021 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1311 486 e-137
3x_Contig343 185 2e-46
>3x_Contig1311
Length = 7212
Score = 486 bits (245), Expect = e-137
Identities = 249/251 (99%)
Strand = Plus / Plus
Query: 751 caacaatgaagtttgataaactaggaactacaatgaaatttattatatacgaaggaatca 810
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 51 caacaatgaagtttgataaactaggaactacaatgaaatgtattatatacgaaggaatca 110
Query: 811 tataccttggatttgaatctggttttgttattgggctacgcyttacacagggattgcata 870
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 111 tataccttggatttgaatctggttttgttattgggctacgccttacacagggattgcata 170
Query: 871 tcgtatacatttcttctgctaattatccagaacctgtactggatttaacggttgggaaag 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tcgtatacatttcttctgctaattatccagaacctgtactggatttaacggttgggaaag 230
Query: 931 acctcggcaaagtcattagctcatctacaaactcttcgcttggccttcatacaccaaata 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 acctcggcaaagtcattagctcatctacaaactcttcgcttggccttcatacaccaaata 290
Query: 991 ttaatacggaa 1001
|||||||||||
Sbjct: 291 ttaatacggaa 301
>3x_Contig343
Length = 1398
Score = 185 bits (93), Expect = 2e-46
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 atcataaatacaaagagttgcgtaatggttagaaactcattagcagcacacacaaaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 atcataaatacaaagagttgcgtaatggttagaaactcattagcagcacacacaaaaaga 1365
Query: 61 agttgagatagataggcgatggtcctcacattt 93
|||||||||||||||||||||||||||||||||
Sbjct: 1366 agttgagatagataggcgatggtcctcacattt 1398
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7523
Number of Sequences: 1807
Number of extensions: 7523
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 1021
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1005
effective length of database: 10,329,639
effective search space: 10381287195
effective search space used: 10381287195
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)